Publikationen

Sammlung wissenschaftlicher Beiträge aus der Vergangenheit:

• Blum, T., Briesemeister,S., and Kohlbacher, O.
  MultiLoc2: integrating phylogenetic profiles and Gene Ontology to improve the prediction of protein subcellular localization
  BMC Bioinformatics 10(1):274
• Briesemeister,S., Blum, T., Brady,S., Lam,Y., Kohlbacher, O., and Shatkay,H.
  SherLoc2: A High-Accuracy Hybrid Method for Predicting Subcellular Localization of Proteins
  Journal of Proteome Research 8(11):5363-6
• Mitschke,J., Fuss,J., Blum,T., Höglund,A., Reski,R., Kohlbacher,O., and Rensing,S.A.
  Prediction of dual protein targeting to plant organelles
  Plant Physiology 183(1):224-35
• Blum, T., and Kohlbacher, O.
  MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization
  Bioinformatics 24(18):2108-9
• Blum, T., and Kohlbacher, O.
  Using atom mapping rules for an improved detection of relevant routes in weighted metabolic networks
  Journal of Computational Biology 15(6), 565-576
• Shatkay, H, Höglund, A, Brady, S, Blum, T, Dönnes, P, and Kohlbacher, O
  SherLoc : High-Accuracy Prediction of Protein Subcellular Localization by Integrating Text and Protein Sequence Data
  Bioinformatics 23(11):1410-7
• Küntzer, J, Backes, C, Blum, T, Gerasch, A, Kaufmann, M, Kohlbacher, O, and Lenhof, H
  BNDB – The Biochemical Network Database
  BMC Bioinformatics 8(1):367
• Blum, T., and Kohlbacher, O.
  Finding relevant biotransformation routes in weighted metabolic networks using atom mapping rules
  In: Proceedings of the German Conference on Bioinformatics (GCB 2007)
• Höglund, A., Dönnes, P., Blum, T., Adolph, H.-W., and Kohlbacher, O.
  MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid composition.
  Bioinformatics 22, 1158-1165
• Höglund, A., Blum, T., Brady, S., Dönnes, P., Miguel, J.S., Rocheford, M., Kohlbacher, O., Shatkay, H.,
  Signifcantly improved prediction of subcellular localization by integrating text and protein sequence data.
  In: Pacifc Symposium on Biocomputing (PSB 2006)
• Küntzer, J, Blum, T, Gerasch, A, Backes, C, Hildebrandt, A, Kaufmann, M, Kohlbacher, O, Lenhof, H
  BN++ - A Biological Information System
  Journal of Integrative Bioinformatics.